Details
| Name | SingleM |
|---|---|
| Version | |
| Description | At heart, SingleM is a tool for profiling shotgun (both short and long-read) metagenomes. It shows good accuracy in estimating the relative abundances of community members, and has a particular strength in dealing with novel lineages. Recent versions have added features: * Long-read input support (v0.20.0). Either Nanopore >= R10.4.1 or PacBio HiFi reads are recommended to ensure reliable taxonomic profiling. * Profiling of dsDNA phages (v0.19.0, updated DB in v0.20.0). See Lyrebird. |
| bio.tools | https://bio.tools/singlem |
| Homepage | https://wwood.github.io/singlem/ |
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