Details
| Name | Falcon |
|---|---|
| Version | 0.3.0 |
| Description | FALCON and FALCON-Unzip are de novo genome assembly programs for PacBio long reads, also known as single-molecule real-time (SMRT) sequences. FALCON is a diploid-aware assembler which follows the hierarchical genome assemble process (HGAP) and is optimized for large genome assembly (e.g. non-microbial). FALCON produces a set of primary contigs, which represent the backbone of the genome sequence, as well as associate contigs which represent divergent allelic variants. Each a-contig is associated with a homologous genomic region on an p-contig. FALCON-Unzip is a true diploid assembler. It takes the genome assembly graph from FALCON and phases the reads based on heterozygous SNPs identified in the initial assembly. It then produces a set of partially phased primary contigs and fully phased haplotigs which represent divergent haplotyes. |
| Homepage | https://github.com/PacificBiosciences/FALCON |
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