Bioinformatics, Genomics, Mapping, Sequence alignment, Data quality management, Sequencing, Workflows, Sequence analysis
aurelien beliard ICM-ICONICS
bam-readcount, BEDTools, BWA, CONCOCT, DESeq2, Diamond, Kraken, MAFFT, Matplotlib, MEGAHIT, prodigal, R - base, SAMtools, SPAdes
Transcriptomics, Informatics, Genomics, Mapping, Metagenomics, Phylogenetics, Bioinformatics, Data visualisation, Statistics and probability, Sequence assembly, Sequence analysis
Lois Maignien, EBAME organization
bcftools, BEDTools, BWA, Canvas, FastQC, GATK, IGV - Integrative Genomics Viewer, IRSOM, Matplotlib, Numpy, pandas, plotnine, SAMtools, TensorFlow
SNP, Data quality management, Informatics, Genetic variation, Genotyping experiment, GWAS study, Mapping, Applied mathematics, Data visualisation, DNA polymorphism, Genomics, Sequencing, Machine learning, Sequence analysis
Vincent MEYER, CNRGH, CEA
Bioinformatics, Computational biology, Data management, Statistics and probability, Sequence assembly, Transcriptomics, RNA-Seq
Stephane Delmotte stephane.delmotte@univ-lyon1.fr
Mathematics, Statistics and probability, Data visualisation, Phylogenomics, Data architecture, analysis and design
Guillaume Launay, Université Claude Bernard Lyon 1 (Environnement pédagogique)
bioPython, bowtie2, cap3, ete3, FastQC, Matplotlib, muscle, Numpy, phyml, pysam, python, QUAST, SAMtools, Scipy, SPAdes, sratoolkit, yass
Phylogenetics, Protein structure analysis, Data visualisation, Phylogenomics, Phylogeny, Mapping, Sequence analysis, Genomics, Sequencing, Informatics, Bioinformatics, Genotype and phenotype, Population genomics, Population genetics, Sequence assembly
Mathieu GENETE, EEP CNRS UMR8198
BEDTools, BLAST, Bowtie, bowtie2, Clustal Omega, cmake, DESeq2, FastQC, MACS2, muscle, phyml, R - base, SAMtools, Seaview, Trinity
Note that the color code has no meaning other than being constant for a given appliance.
