Details
| Name | RepeatModeler |
|---|---|
| Version | |
| Description | RepeatModeler is a de novo transposable element (TE) family identification and modeling package. At the heart of RepeatModeler are three de-novo repeat finding programs ( RECON, RepeatScout and LtrHarvest/Ltr_retriever ) which employ complementary computational methods for identifying repeat element boundaries and family relationships from sequence data. RepeatModeler assists in automating the runs of the various algorithms given a genomic database, clustering redundant results, refining and classifying the families and producing a high quality library of TE families suitable for use with RepeatMasker and ultimately for submission to the Dfam database (http://dfam.org). |
| bio.tools | https://bio.tools/RepeatModeler2 |
| Homepage | http://www.repeatmasker.org/RepeatModeler/ |
Associated topics.
How to use:Expand/collapse node by clicking on them.
